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What makes the Omicron variant spread so easily?

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The Omicron variant arrived in the US proper round Thanksgiving. Lower than a month later, it’s the nation’s dominant coronavirus pressure, accounting for 73% of recent infections final week, in response to the Facilities for Illness Management and Prevention.

How did that occur? Infectious illness consultants say there are two key components that decide how shortly a virus will unfold: how simply it’s transmitted and the way effectively it eludes the physique’s defenses.

Early analysis suggests Omicron has benefits in each areas. However the knowledge additionally counsel the variant’s larger fee of transmission hasn’t led to extra hospitalizations or deaths.

Preliminary outcomes from a Dec. 14 research led by Alejandro B. Balazs of the Ragon Institute in Cambridge, Mass., discovered that Omicron was twice as infectious because the Delta variant and 4 occasions extra infectious than the unique virus. That research, which has but to be peer-reviewed, relied on a comparatively small pattern of 239 sufferers in and round Boston, so the outcomes might not be consultant of Omicron’s habits normally.

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Nonetheless, stated Dr. David Delight, an infectious illness specialist at UC San Diego, “simply taking a look at [the current situation] epidemiologically, we all know one thing is means completely different this time round.”

With so many unvaccinated folks on the market, he added, “it was only a matter of time earlier than we’d see a mutated model of the virus that’s simply higher at infecting vaccinated folks.”

It’s virtually an evolutionary crucial, stated Jasmine Plummer, a analysis scientist at Cedars-Sinai Medical Heart in Los Angeles who was a part of the crew that found the Epsilon variant of the virus final winter.

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“Variants come up due to viruses making an attempt to outlive,” Plummer stated. “All viruses evolve to evade their host. So we knew an Omicron was coming.”

And right here we’re.

Fast replication

One secret of Omicron’s success seems to be its means to copy quickly. Researchers from the College of Hong Kong reported that in contrast with Delta, Omicron “infects and multiplies 70 occasions sooner” within the bronchus, the principle airways into the lungs. Its benefit over the unique virus is even larger, they added. The distinction was obvious a mere 24 hours after an infection.

If that’s certainly the case, it implies that folks contaminated by the Omicron variant have much more virus of their throats ready to be expelled into the air once they exhale — and particularly once they cough or sneeze. It additionally means that they might be infectious sooner, which additionally would velocity the unfold of the illness.

One doubtlessly useful signal from the Hong Kong analysis: Omicron moved extra slowly from the throat into the lungs. Of their experiments, the scientists discovered the brand new pressure replicated within the lungs at lower than one-tenth the speed of the unique virus. That “could counsel decrease severity of illness,” in response to the college.

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Delight stated Omicron is spreading extra simply inside households, suggesting the virus will get spewed into the air extra simply. One other risk is {that a} smaller quantity of Omicron is required to trigger an an infection, he stated.

There’s loads we nonetheless don’t find out about how the Omicron variant is transmitted, however the CDC expects that “anybody with Omicron an infection can unfold the virus to others, even when they’re vaccinated or don’t have signs.”

Delight put it one other means: “We all know this illness spreads through folks, thus the one option to be fairly certain you’re not going to get it’s to not be round folks.”

The spike protein

The coronavirus that causes COVID-19 employs a spike-shaped protein on its floor to penetrate wholesome cells and use them to churn out copies of itself. The vaccines out there in the US immediate the creation of antibodies that acknowledge that spike protein and goal it for destruction by the physique’s immune system.

Omicron has an unprecedented variety of mutations that have an effect on the spike. About three dozen have been tallied by Balazs and his crew, and their location suggests they make it tougher for antibodies to acknowledge an Omicron virus particle. That’s true no matter whether or not the antibodies have been generated by a vaccine or a earlier an infection, they wrote.

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Researchers on the College of British Columbia in Canada examined the Omicron proteins affected by these mutations on a molecular degree. They discovered that, on stability, the modifications enabled the spike protein to bond extra strongly to human cells than the unique coronavirus might. They posted their findings on BioRXiv, a web site the place scientists search suggestions on preliminary work.

Sriram Subramaniam, the senior writer of the research, stated in an interview with the college that even small modifications within the spike protein “have doubtlessly huge implications for a way the virus is transmitted, how our physique fights it off, and the effectiveness of remedies.”

He added: “Our experiments affirm what we’re seeing in the true world — that the Omicron spike protein is much better than different variants at … evading the immunity produced by each vaccines and pure an infection.”

Subramaniam stated it was notable that the immunity generated by vaccines was more practical towards Omicron than the immunity from a earlier an infection in unvaccinated sufferers. It’s one other signal “that vaccination stays our greatest protection towards the Omicron variant,” he stated.

However that protection might not be very efficient with out a booster.

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Balazs’ research discovered that the safety afforded by vaccines or a earlier coronavirus an infection was “dramatically decreased” towards Omicron. The one exception was in individuals who’d just lately acquired a booster dose of the vaccine; they “exhibited potent neutralization of Omicron,” in response to the research.

That will assist to clarify why “breakthrough” circumstances and reinfections look like rising quickly. A South African analysis crew reported on Dec. 2 greater than 35,000 COVID-19 reinfections among the many 2.8 million individuals who’d examined constructive over the earlier three months.

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Live poultry markets may be source of bird flu virus in San Francisco wastewater

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Live poultry markets may be source of bird flu virus in San Francisco wastewater

Federal officials suspect that live bird markets in San Francisco may be the source of bird flu virus in area wastewater samples.

Days after health monitors reported the discovery of suspected avian flu viral particles in wastewater treatment plants, federal officials announced that they were looking at poultry markets near the treatment facilities.

Last month, San Francisco Public Health Department officials reported that state investigators had detected H5N1 — the avian flu subtype making its way through U.S. cattle, domestic poultry and wild birds — in two chickens at a live market in May. They also noted they had discovered the virus in city wastewater samples collected during that period.

Two new “hits” of the virus were recorded from wastewater samples collected June 18 and June 26 by WastewaterSCAN, an infectious-disease monitoring network run by researchers at Stanford, Emory University and Verily, Alphabet Inc.’s life sciences organization.

Nirav Shah, principal deputy director of the U.S. Centers for Disease Control and Prevention, said that although the source of the virus in those samples has not been determined, live poultry markets were a potential culprit.

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Hits of the virus were also discovered in wastewater samples from the Bay Area cities of Palo Alto and Richmond. It is unclear if those cities host live bird markets, stores where customers can take a live bird home or have it processed on-site for food.

Steve Lyle, a spokesman for the state’s Department of Food and Agriculture, said live bird markets undergo regular testing for avian influenza.

He said that aside from the May 9 detection in San Francisco, there have been no “other positives in Live Bird Markets throughout the state during this present outbreak of highly-pathogenic avian flu.”

San Francisco’s health department referred all questions to the state.

Even if the state or city had missed a few infected birds, John Korslund, a retired U.S. Department of Agriculture veterinarian epidemiologist, seemed incredulous that a few birds could cause a positive hit in the city’s wastewater.

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“Unless you’ve got huge amounts of infected birds — in which case you ought to have some dead birds, too — it’d take a lot of bird poop” to become detectable in a city’s wastewater system, he said.

“But the question still remains: Has anyone done sequencing?” he said. “It makes me want to tear my hair out.”

He said genetic sequencing would help health officials determine the origin of viral particles — whether they came from dairy milk, or from wild birds. Some epidemiologists have voiced concerns about the spread of H5N1 among dairy cows, because the animals could act as a vessel in which bird and human viruses could interact.

However, Alexandria Boehm, professor of civil and environmental engineering at Stanford University and principal investigator and program director for WastewaterSCAN, said her organization is not yet “able to reliably sequence H5 influenza in wastewater. We are working on it, but the methods are not good enough for prime time yet.”

A review of businesses around San Francisco’s southeast wastewater treatment facility indicates a dairy processing plant as well as a warehouse store for a “member-supported community of people that feed raw or cooked fresh food diets to their pets.”

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Be grateful for what you have. It may help you live longer

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Be grateful for what you have. It may help you live longer

Death may be inevitable, but that hasn’t stopped health researchers from looking for ways to put it off as long as possible. Their newest candidate is something that’s free, painless, doesn’t taste bad and won’t force you to break a sweat: Gratitude.

A new study of nearly 50,000 older women found that the stronger their feelings of gratitude, the lower their chances of dying over the next three years.

The results are sure to be appreciated by those who are naturally inclined toward giving thanks. Those who aren’t may be grateful to learn that with practice, they might be able to enhance their feelings of gratitude and reap the longevity benefits as well.

“It’s an exciting study,” said Joel Wong, a professor of counseling psychology at the University of Indiana who researches gratitude interventions and practices and wasn’t involved in the new work.

Mounting evidence has linked gratitude with a host of benefits for mental and physical health. People who score higher on measures of gratitude have been found to have better biomarkers for cardiovascular function, immune system inflammation and cholesterol. They are more likely to take their medications, get regular exercise, have healthy sleep habits and follow a balanced diet.

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Gratitude is also associated with a lower risk of depression, better social support and having a greater purpose in life, all of which are linked with longevity.

However, this is the first time researchers have directly linked gratitude to a lower risk of earlier death, Wong and others said.

“It’s not surprising, but it’s always good to see empirical research supporting the idea that gratitude is not only good for your mental health but also for living a longer life,” Wong said.

Study leader Ying Chen, an empirical research scientist with the Human Flourishing Program at Harvard University, said she was amazed by the dearth of studies on gratitude and mortality. So she and her colleagues turned to data from the Nurses Health Study, which has been tracking the health and habits of thousands of American women since 1976.

In 2016, those efforts included a test to measure the nurses’ feelings of gratitude. The women were asked to use a seven-point scale to indicate the degree to which they agreed or disagreed with six statements, including “I have so much in life to be thankful for” and “If I had to list everything I felt grateful for, it would be a very long list.”

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A total of 49,275 women responded, and the researchers divided them into three roughly equal groups based on their gratitude scores. Compared with the women with the lowest scores, those with the highest scores tended to be younger, more likely to have a spouse or partner, more involved in social and religious groups, and in generally better health, among other differences.

The average age of nurses who answered the gratitude questions was 79, and by the end of 2019, 4,068 of them had died. After accounting for a variety of factors such as the median household income in their census tract, their retirement status, and their involvement in a religious community, Chen and her colleagues found that the nurses with the most gratitude were 29% less likely to have died than the nurses with the least gratitude.

Then they dug deeper by controlling for a range of health issues, including a history of heart disease, stroke, cancer and diabetes. The risk of death for the most grateful women was still 27% lower than for their least grateful counterparts.

When the researchers considered the effects of smoking, drinking, exercise, body mass index and diet quality, the risk of death for the nurses with the most gratitude remained lower, by 21%.

Finally, Chen and her colleagues added in measures of cognitive function, mental health and psychological well-being. Even after accounting for those variables, the mortality risk was 9% lower for nurses with the highest gratitude scores.

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The findings were published Wednesday in JAMA Psychiatry.

Although the study shows a clear link between gratitude and longevity, it doesn’t prove that one caused the other. While it’s plausible that gratitude helps people live longer, it’s also possible that being in good health inspires people to feel grateful, or that both are influenced by a third factor that wasn’t accounted for in the study data.

Sonja Lyubomirsky, an experimental social psychologist at UC Riverside who studies gratitude and was not involved in the study, said she suspects all three things are at work.

Another limitation is that all of the study participants were older women, and 97% of them were white. Whether the findings would extend to a more diverse population is unknown, Wong said, “but drawing on theory and research, I don’t see a reason why it wouldn’t.”

There can be downsides to gratitude, the Harvard team noted: If it’s tied to feelings of indebtedness, it can undermine one’s sense of autonomy or accentuate a hierarchical relationship. Lyubomirsky added that it can make people feel like they’re a burden to others, which is particularly dangerous for someone with depression who is feeling suicidal.

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But in most cases, gratitude is an emotion worth cultivating, Lyubomirsky said. Clinical trials have shown that gratitude can be enhanced through simple interventions, such as keeping a gratitude journal or writing a thank-you letter and delivering it by hand.

“Gratitude is a skill that you can build,” she said.

And like diet and exercise, it appears to be a modifiable risk factor for better health.

Lyubomirsky has found that teenagers who were randomly assigned to compose letters of gratitude to their parents, teachers or coaches took it upon themselves to eat more fruits and vegetables and cut back on junk food and fast food — a behavior not shared by classmates in a control group. Perhaps after reflecting on the time, money and other resources invested in them, the teens were inspired to protect that investment, she said.

More research will be needed to see whether interventions like these can extend people’s lives, but Chen is optimistic.

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“As the evidence accumulates, we’ll have a better understanding of how to effectively enhance gratitude and whether it can meaningfully improve people’s long-term health and well-being,” she said.

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Drug can amplify naloxone's effect and reduce opioid withdrawals, study shows

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Drug can amplify naloxone's effect and reduce opioid withdrawals, study shows

Naloxone has long been hailed as a life-saving drug in the face of the opioid epidemic. But its capacity to save someone from an overdose can be limited by the potency of the opioid — a person revived by naloxone can still overdose once it wears off.

Stanford researchers have found a companion drug that can enhance naloxone’s effect — and reduce withdrawal symptoms. Their research on mice, led by Stanford University postdoctoral scholar Evan O’Brien, was published today in Nature.

Typically, overdose deaths occur when opioids bind to the part of the brain that controls breathing, slowing it to a stop. Naloxone reverses overdoses by kicking opioids off pain receptors and allowing normal breathing to resume.

However, it is only able to occupy pain receptors for 30 to 90 minutes. For more potent opioids, such as fentanyl, that may not be long enough.

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To determine how the naloxone companion drug, which researchers are calling compound 368, might boost naloxone’s effectiveness, researchers conducted an experiment on pain tolerance in mice, said Jay McLaughlin, a professor of pharmacology at the University of Florida. How quickly would mice pull their tails out of hot water, depending on which combination of opioids and treatments they were given?

Mice that were injected with only morphine did not respond to the hot water — given their dulled pain receptors. Mice given morphine and naloxone pulled their tails out within seconds. No surprises yet.

When the dosage of naloxone was reduced and compound 368 was added, the compound was found to amplify naloxone’s effects, as if a regular dose was used. When used on its own, the compound had no effect, indicating that it is only helpful in increasing the potency of naloxone.

What researchers did not expect, however, was that the compound reduced withdrawal symptoms.

McLaughlin said withdrawal is one reason that people who have become physically dependent on opioids may avoid naloxone.

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“Opioid withdrawal will not kill you, but I have talked to a number of people who have gone through it, and they have all said the same thing: … ‘I wished I was dead,’” McLaughlin said. “It has a massive range of nasty, horrible effects.”

The idea that the compound could amplify naloxone’s effect at a lower dosage, while limiting withdrawal symptoms, indicates that it may be a “new therapeutic approach” to overdose response, McLaughlin said.

The research team said their next step is to tweak the compound and dosage so that the effects of naloxone last long enough to reverse overdoses of more potent drugs.

Though the compound is not yet ready for human trials, the researchers chose to release their findings in the hope that their peers can double check and improve upon their work, said Susruta Majumdar, another senior author and a professor of anesthesiology at the Washington University School of Medicine in St. Louis.

“We may not be able to get that drug into the clinic, but somebody else may,” Majumdar said. He added: “Let them win the race.”

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